Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccl1P10146 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccl1P10146 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccl1P10146 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccl1P10146 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccl1P10146 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccl1P10146 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Ccl1P10146 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccl1P10146 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccl1P10146 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.95□□□□□ -0.5
Ccl1P10146 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccl1P10146 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccl1P10146 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.94□□□□□ -0.5
Ccl1P10146 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ccl1P10146 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccl1P10146 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.94□□□□□ -0.5
Ccl1P10146 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.94□□□□□ -0.5
Ccl1P10146 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Ccl1P10146 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ccl1P10146 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccl1P10146 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ccl1P10146 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Ccl1P10146 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC11.94□□□□□ -0.5
Ccl1P10146 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ccl1P10146 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccl1P10146 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Ccl1P10146 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ccl1P10146 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccl1P10146 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccl1P10146 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl1P10146 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl1P10146 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl1P10146 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl1P10146 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccl1P10146 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccl1P10146 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Ccl1P10146 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl1P10146 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccl1P10146 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl1P10146 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl1P10146 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccl1P10146 Gm5643-201ENSMUST00000117081 966 ntBASIC11.93□□□□□ -0.5
Ccl1P10146 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.93□□□□□ -0.5
Ccl1P10146 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl1P10146 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.93□□□□□ -0.5
Ccl1P10146 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccl1P10146 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccl1P10146 Gm10698-201ENSMUST00000182663 604 ntBASIC11.93□□□□□ -0.5
Ccl1P10146 Trmt13-210ENSMUST00000198454 880 ntBASIC11.93□□□□□ -0.5
Ccl1P10146 Gm16042-201ENSMUST00000204813 1247 ntBASIC11.93□□□□□ -0.5
Ccl1P10146 Timm23-208ENSMUST00000226683 750 ntBASIC11.93□□□□□ -0.5
Ccl1P10146 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccl1P10146 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl1P10146 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl1P10146 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl1P10146 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl1P10146 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccl1P10146 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl1P10146 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl1P10146 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl1P10146 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ccl1P10146 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl1P10146 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.93□□□□□ -0.5
Ccl1P10146 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccl1P10146 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ccl1P10146 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccl1P10146 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl1P10146 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl1P10146 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccl1P10146 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl1P10146 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ccl1P10146 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl1P10146 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ccl1P10146 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl1P10146 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ccl1P10146 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms