Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp6P0C0A3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp6P0C0A3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp6P0C0A3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp6P0C0A3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp6P0C0A3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Chmp6P0C0A3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.73■□□□□ 0.27
Chmp6P0C0A3 Gm7862-201ENSMUST00000121461 292 ntBASIC16.73■□□□□ 0.27
Chmp6P0C0A3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp6P0C0A3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp6P0C0A3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.73■□□□□ 0.27
Chmp6P0C0A3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Chmp6P0C0A3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.73■□□□□ 0.27
Chmp6P0C0A3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp6P0C0A3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp6P0C0A3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Chmp6P0C0A3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp6P0C0A3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp6P0C0A3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Chmp6P0C0A3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp6P0C0A3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp6P0C0A3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp6P0C0A3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp6P0C0A3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp6P0C0A3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp6P0C0A3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp6P0C0A3 Gm15173-201ENSMUST00000122049 433 ntBASIC16.72■□□□□ 0.27
Chmp6P0C0A3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Chmp6P0C0A3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Chmp6P0C0A3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp6P0C0A3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp6P0C0A3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.72■□□□□ 0.27
Chmp6P0C0A3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp6P0C0A3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp6P0C0A3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp6P0C0A3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp6P0C0A3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp6P0C0A3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp6P0C0A3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp6P0C0A3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp6P0C0A3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp6P0C0A3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp6P0C0A3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Chmp6P0C0A3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp6P0C0A3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp6P0C0A3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Chmp6P0C0A3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
Chmp6P0C0A3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
Chmp6P0C0A3 Gm18195-201ENSMUST00000207604 706 ntBASIC16.71■□□□□ 0.27
Chmp6P0C0A3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp6P0C0A3 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.71■□□□□ 0.27
Chmp6P0C0A3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp6P0C0A3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp6P0C0A3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp6P0C0A3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp6P0C0A3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Chmp6P0C0A3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp6P0C0A3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.71■□□□□ 0.26
Chmp6P0C0A3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Gm25990-201ENSMUST00000102440 86 ntBASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Gm11780-201ENSMUST00000136880 516 ntBASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 App-207ENSMUST00000227737 2827 ntBASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp6P0C0A3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp6P0C0A3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp6P0C0A3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp6P0C0A3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp6P0C0A3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Chmp6P0C0A3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms