Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Krt1P04104 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.56□□□□□ -0.08
Krt1P04104 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Krt1P04104 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Krt1P04104 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Krt1P04104 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Krt1P04104 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Krt1P04104 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Krt1P04104 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Krt1P04104 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Krt1P04104 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Krt1P04104 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.55□□□□□ -0.08
Krt1P04104 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Krt1P04104 Gm37179-201ENSMUST00000194862 823 ntBASIC14.55□□□□□ -0.08
Krt1P04104 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Krt1P04104 Gm10602-201ENSMUST00000098239 609 ntBASIC14.55□□□□□ -0.08
Krt1P04104 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Krt1P04104 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.55□□□□□ -0.08
Krt1P04104 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Krt1P04104 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Krt1P04104 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Krt1P04104 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Krt1P04104 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Krt1P04104 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Krt1P04104 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Krt1P04104 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Krt1P04104 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.55□□□□□ -0.08
Krt1P04104 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Krt1P04104 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Krt1P04104 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Krt1P04104 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Krt1P04104 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt1P04104 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Krt1P04104 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt1P04104 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt1P04104 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt1P04104 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt1P04104 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Krt1P04104 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt1P04104 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt1P04104 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt1P04104 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Krt1P04104 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt1P04104 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt1P04104 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt1P04104 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt1P04104 Gm11336-201ENSMUST00000118168 334 ntBASIC14.54□□□□□ -0.08
Krt1P04104 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
Krt1P04104 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Krt1P04104 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Krt1P04104 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Krt1P04104 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Krt1P04104 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt1P04104 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt1P04104 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt1P04104 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Krt1P04104 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Krt1P04104 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt1P04104 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Krt1P04104 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.54□□□□□ -0.08
Krt1P04104 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Krt1P04104 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Krt1P04104 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Krt1P04104 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt1P04104 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt1P04104 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt1P04104 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Krt1P04104 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Krt1P04104 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Krt1P04104 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Krt1P04104 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt1P04104 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Krt1P04104 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt1P04104 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.53□□□□□ -0.08
Krt1P04104 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.53□□□□□ -0.08
Krt1P04104 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.53□□□□□ -0.08
Krt1P04104 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt1P04104 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt1P04104 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt1P04104 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt1P04104 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Krt1P04104 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Krt1P04104 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Krt1P04104 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt1P04104 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Krt1P04104 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Krt1P04104 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt1P04104 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt1P04104 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt1P04104 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Krt1P04104 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt1P04104 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Krt1P04104 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Krt1P04104 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt1P04104 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Krt1P04104 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Krt1P04104 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Krt1P04104 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.52□□□□□ -0.08
Krt1P04104 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Krt1P04104 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms