Protein–RNA interactions for Protein: P01649

Ig kappa chain V-V regions, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01649 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.81□□□□□ -0.36
P01649 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P01649 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
P01649 Gm12260-201ENSMUST00000122447 411 ntBASIC12.81□□□□□ -0.36
P01649 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.81□□□□□ -0.36
P01649 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P01649 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
P01649 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01649 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01649 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01649 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01649 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01649 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01649 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01649 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
P01649 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01649 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01649 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01649 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
P01649 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.81□□□□□ -0.36
P01649 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01649 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P01649 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01649 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01649 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P01649 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.8□□□□□ -0.36
P01649 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
P01649 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P01649 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P01649 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01649 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01649 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.8□□□□□ -0.36
P01649 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
P01649 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
P01649 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01649 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.8□□□□□ -0.36
P01649 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.8□□□□□ -0.36
P01649 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01649 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
P01649 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01649 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01649 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01649 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01649 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01649 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
P01649 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01649 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01649 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01649 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01649 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P01649 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01649 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01649 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
P01649 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.79□□□□□ -0.36
P01649 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
P01649 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Gm5264-201ENSMUST00000190584 848 ntBASIC12.79□□□□□ -0.36
P01649 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
P01649 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
P01649 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.79□□□□□ -0.36
P01649 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P01649 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
P01649 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.78□□□□□ -0.36
P01649 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P01649 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
P01649 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P01649 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P01649 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
P01649 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P01649 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P01649 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P01649 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
P01649 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P01649 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P01649 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
P01649 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P01649 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.78□□□□□ -0.36
P01649 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms