Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Best1O88870 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Best1O88870 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Best1O88870 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Best1O88870 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Best1O88870 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
Best1O88870 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Best1O88870 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Best1O88870 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Best1O88870 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.71□□□□□ -0.05
Best1O88870 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Best1O88870 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Best1O88870 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Best1O88870 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Best1O88870 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Best1O88870 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Best1O88870 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Best1O88870 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Best1O88870 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Best1O88870 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.7□□□□□ -0.06
Best1O88870 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.7□□□□□ -0.06
Best1O88870 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Best1O88870 Gm9385-201ENSMUST00000117563 472 ntBASIC14.7□□□□□ -0.06
Best1O88870 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.7□□□□□ -0.06
Best1O88870 Gm26308-201ENSMUST00000157768 69 ntBASIC14.7□□□□□ -0.06
Best1O88870 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.7□□□□□ -0.06
Best1O88870 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Best1O88870 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Best1O88870 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Best1O88870 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Best1O88870 App-207ENSMUST00000227737 2827 ntBASIC14.7□□□□□ -0.06
Best1O88870 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Best1O88870 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Best1O88870 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Best1O88870 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Best1O88870 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.7□□□□□ -0.06
Best1O88870 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Best1O88870 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Best1O88870 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Best1O88870 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Best1O88870 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Best1O88870 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.69□□□□□ -0.06
Best1O88870 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Best1O88870 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Best1O88870 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Best1O88870 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.69□□□□□ -0.06
Best1O88870 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Best1O88870 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.69□□□□□ -0.06
Best1O88870 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Best1O88870 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.69□□□□□ -0.06
Best1O88870 Gm20553-201ENSMUST00000204205 844 ntBASIC14.69□□□□□ -0.06
Best1O88870 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.69□□□□□ -0.06
Best1O88870 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.69□□□□□ -0.06
Best1O88870 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Best1O88870 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Best1O88870 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Best1O88870 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Best1O88870 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Best1O88870 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Best1O88870 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Best1O88870 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Best1O88870 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Best1O88870 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Best1O88870 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Best1O88870 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Best1O88870 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Best1O88870 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Best1O88870 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Best1O88870 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Best1O88870 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Best1O88870 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.68□□□□□ -0.06
Best1O88870 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Best1O88870 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Best1O88870 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Best1O88870 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Best1O88870 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Best1O88870 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Best1O88870 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Best1O88870 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Best1O88870 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.68□□□□□ -0.06
Best1O88870 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Best1O88870 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Best1O88870 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
Best1O88870 Celf4-206ENSMUST00000224553 1729 ntBASIC14.68□□□□□ -0.06
Best1O88870 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Best1O88870 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Best1O88870 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Best1O88870 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Best1O88870 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Best1O88870 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Best1O88870 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Best1O88870 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Best1O88870 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.68□□□□□ -0.06
Best1O88870 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Best1O88870 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.68□□□□□ -0.06
Best1O88870 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Best1O88870 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Best1O88870 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Best1O88870 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.67□□□□□ -0.06
Best1O88870 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms