Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tulp3O88413 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.34□□□□□ -0.11
Tulp3O88413 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tulp3O88413 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tulp3O88413 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tulp3O88413 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tulp3O88413 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tulp3O88413 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tulp3O88413 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Tulp3O88413 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tulp3O88413 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tulp3O88413 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tulp3O88413 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tulp3O88413 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tulp3O88413 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tulp3O88413 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Tulp3O88413 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tulp3O88413 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tulp3O88413 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tulp3O88413 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tulp3O88413 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tulp3O88413 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tulp3O88413 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tulp3O88413 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tulp3O88413 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tulp3O88413 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tulp3O88413 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tulp3O88413 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.33□□□□□ -0.12
Tulp3O88413 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tulp3O88413 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Tulp3O88413 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.33□□□□□ -0.12
Tulp3O88413 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Tulp3O88413 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tulp3O88413 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tulp3O88413 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tulp3O88413 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tulp3O88413 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tulp3O88413 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tulp3O88413 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tulp3O88413 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tulp3O88413 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tulp3O88413 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.33□□□□□ -0.12
Tulp3O88413 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.33□□□□□ -0.12
Tulp3O88413 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tulp3O88413 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tulp3O88413 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tulp3O88413 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tulp3O88413 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Tulp3O88413 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tulp3O88413 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tulp3O88413 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Tulp3O88413 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Tulp3O88413 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 Efs-202ENSMUST00000227037 2540 ntBASIC14.32□□□□□ -0.12
Tulp3O88413 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.32□□□□□ -0.12
Tulp3O88413 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.32□□□□□ -0.12
Tulp3O88413 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Tulp3O88413 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.32□□□□□ -0.12
Tulp3O88413 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.32□□□□□ -0.12
Tulp3O88413 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.32□□□□□ -0.12
Tulp3O88413 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Tulp3O88413 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.32□□□□□ -0.12
Tulp3O88413 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.32□□□□□ -0.12
Tulp3O88413 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tulp3O88413 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Tulp3O88413 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.31□□□□□ -0.12
Tulp3O88413 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Tulp3O88413 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms