Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cfdp1O88271 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cfdp1O88271 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC19.11■□□□□ 0.65
Cfdp1O88271 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cfdp1O88271 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
Cfdp1O88271 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cfdp1O88271 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cfdp1O88271 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cfdp1O88271 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cfdp1O88271 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cfdp1O88271 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cfdp1O88271 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cfdp1O88271 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.1■□□□□ 0.65
Cfdp1O88271 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cfdp1O88271 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cfdp1O88271 AC163637.1-201ENSMUST00000215491 1894 ntBASIC19.1■□□□□ 0.65
Cfdp1O88271 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cfdp1O88271 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.1■□□□□ 0.65
Cfdp1O88271 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cfdp1O88271 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cfdp1O88271 Gm5867-201ENSMUST00000063197 592 ntBASIC19.1■□□□□ 0.65
Cfdp1O88271 Gm10175-201ENSMUST00000086013 645 ntBASIC19.1■□□□□ 0.65
Cfdp1O88271 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cfdp1O88271 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cfdp1O88271 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cfdp1O88271 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cfdp1O88271 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cfdp1O88271 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cfdp1O88271 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cfdp1O88271 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.09■□□□□ 0.65
Cfdp1O88271 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cfdp1O88271 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cfdp1O88271 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cfdp1O88271 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cfdp1O88271 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cfdp1O88271 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Cfdp1O88271 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cfdp1O88271 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Cfdp1O88271 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC19.09■□□□□ 0.65
Cfdp1O88271 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC19.09■□□□□ 0.65
Cfdp1O88271 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cfdp1O88271 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC19.09■□□□□ 0.65
Cfdp1O88271 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC19.09■□□□□ 0.65
Cfdp1O88271 AC159295.1-201ENSMUST00000225326 940 ntBASIC19.09■□□□□ 0.65
Cfdp1O88271 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cfdp1O88271 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC19.09■□□□□ 0.65
Cfdp1O88271 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Cfdp1O88271 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Cfdp1O88271 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cfdp1O88271 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cfdp1O88271 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cfdp1O88271 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cfdp1O88271 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cfdp1O88271 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cfdp1O88271 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cfdp1O88271 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cfdp1O88271 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cfdp1O88271 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cfdp1O88271 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cfdp1O88271 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cfdp1O88271 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cfdp1O88271 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC19.08■□□□□ 0.64
Cfdp1O88271 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Cfdp1O88271 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Cfdp1O88271 Gm17968-201ENSMUST00000194902 784 ntBASIC19.08■□□□□ 0.64
Cfdp1O88271 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cfdp1O88271 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cfdp1O88271 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cfdp1O88271 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Cfdp1O88271 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cfdp1O88271 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cfdp1O88271 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cfdp1O88271 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cfdp1O88271 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cfdp1O88271 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cfdp1O88271 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cfdp1O88271 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cfdp1O88271 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cfdp1O88271 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cfdp1O88271 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cfdp1O88271 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cfdp1O88271 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cfdp1O88271 Gm25911-201ENSMUST00000157621 56 ntBASIC19.07■□□□□ 0.64
Cfdp1O88271 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC19.07■□□□□ 0.64
Cfdp1O88271 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.07■□□□□ 0.64
Cfdp1O88271 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cfdp1O88271 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Cfdp1O88271 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cfdp1O88271 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Cfdp1O88271 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cfdp1O88271 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cfdp1O88271 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cfdp1O88271 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cfdp1O88271 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cfdp1O88271 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cfdp1O88271 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Cfdp1O88271 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cfdp1O88271 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cfdp1O88271 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cfdp1O88271 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms