Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubr1O70481 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubr1O70481 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
Ubr1O70481 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ubr1O70481 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.69■□□□□ 0.74
Ubr1O70481 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubr1O70481 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubr1O70481 Gm6756-201ENSMUST00000180647 1620 ntBASIC19.69■□□□□ 0.74
Ubr1O70481 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ubr1O70481 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.69■□□□□ 0.74
Ubr1O70481 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubr1O70481 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC19.69■□□□□ 0.74
Ubr1O70481 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ubr1O70481 Gm10313-201ENSMUST00000095320 1002 ntBASIC19.69■□□□□ 0.74
Ubr1O70481 Mxra8os-201ENSMUST00000097740 687 ntBASIC19.69■□□□□ 0.74
Ubr1O70481 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubr1O70481 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubr1O70481 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ubr1O70481 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr1O70481 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr1O70481 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr1O70481 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC19.68■□□□□ 0.74
Ubr1O70481 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr1O70481 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr1O70481 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr1O70481 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr1O70481 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr1O70481 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr1O70481 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr1O70481 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC19.68■□□□□ 0.74
Ubr1O70481 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr1O70481 Gtpbp10-211ENSMUST00000198799 648 ntBASIC19.68■□□□□ 0.74
Ubr1O70481 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC19.68■□□□□ 0.74
Ubr1O70481 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr1O70481 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr1O70481 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC19.68■□□□□ 0.74
Ubr1O70481 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr1O70481 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC19.68■□□□□ 0.74
Ubr1O70481 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Ubr1O70481 Gm8242-201ENSMUST00000193029 1420 ntBASIC19.68■□□□□ 0.74
Ubr1O70481 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ubr1O70481 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr1O70481 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr1O70481 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr1O70481 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr1O70481 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr1O70481 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC19.68■□□□□ 0.74
Ubr1O70481 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubr1O70481 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ubr1O70481 Gm22189-201ENSMUST00000103822 86 ntBASIC19.67■□□□□ 0.74
Ubr1O70481 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC19.67■□□□□ 0.74
Ubr1O70481 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC19.67■□□□□ 0.74
Ubr1O70481 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubr1O70481 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ubr1O70481 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubr1O70481 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubr1O70481 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubr1O70481 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubr1O70481 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubr1O70481 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ubr1O70481 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubr1O70481 Tcf21-202ENSMUST00000218002 1788 ntBASIC19.67■□□□□ 0.74
Ubr1O70481 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ubr1O70481 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubr1O70481 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Ubr1O70481 Gm6473-201ENSMUST00000188572 1210 ntBASIC19.67■□□□□ 0.74
Ubr1O70481 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubr1O70481 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubr1O70481 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Ubr1O70481 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubr1O70481 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubr1O70481 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubr1O70481 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ubr1O70481 Ccdc166-201ENSMUST00000182172 2584 ntBASIC19.66■□□□□ 0.74
Ubr1O70481 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubr1O70481 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Ubr1O70481 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC19.66■□□□□ 0.74
Ubr1O70481 Gm44855-201ENSMUST00000205725 362 ntBASIC19.66■□□□□ 0.74
Ubr1O70481 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ubr1O70481 AC149588.3-201ENSMUST00000227515 150 ntBASIC19.66■□□□□ 0.74
Ubr1O70481 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubr1O70481 Hist1h2al-201ENSMUST00000091708 339 ntBASIC19.66■□□□□ 0.74
Ubr1O70481 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubr1O70481 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubr1O70481 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubr1O70481 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ubr1O70481 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubr1O70481 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ubr1O70481 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubr1O70481 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubr1O70481 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubr1O70481 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ubr1O70481 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubr1O70481 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ubr1O70481 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubr1O70481 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Ubr1O70481 Gm5566-201ENSMUST00000116118 459 ntBASIC19.65■□□□□ 0.74
Ubr1O70481 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ubr1O70481 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ubr1O70481 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms