Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.01□□□□□ -0.17
Alx3O70137 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx3O70137 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx3O70137 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx3O70137 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx3O70137 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.01□□□□□ -0.17
Alx3O70137 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx3O70137 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Alx3O70137 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Alx3O70137 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx3O70137 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx3O70137 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14□□□□□ -0.17
Alx3O70137 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx3O70137 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx3O70137 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx3O70137 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14□□□□□ -0.17
Alx3O70137 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx3O70137 App-207ENSMUST00000227737 2827 ntBASIC14□□□□□ -0.17
Alx3O70137 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14□□□□□ -0.17
Alx3O70137 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Alx3O70137 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx3O70137 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Alx3O70137 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx3O70137 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx3O70137 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Alx3O70137 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Alx3O70137 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx3O70137 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14□□□□□ -0.17
Alx3O70137 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx3O70137 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Alx3O70137 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx3O70137 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx3O70137 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx3O70137 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Alx3O70137 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx3O70137 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Alx3O70137 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Alx3O70137 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx3O70137 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Alx3O70137 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Alx3O70137 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Alx3O70137 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Alx3O70137 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Alx3O70137 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Alx3O70137 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Alx3O70137 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Alx3O70137 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Alx3O70137 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Alx3O70137 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.99□□□□□ -0.17
Alx3O70137 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Alx3O70137 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Alx3O70137 Gm9172-201ENSMUST00000212092 954 ntBASIC13.99□□□□□ -0.17
Alx3O70137 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.99□□□□□ -0.17
Alx3O70137 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Alx3O70137 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Alx3O70137 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Alx3O70137 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Alx3O70137 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Alx3O70137 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.99□□□□□ -0.17
Alx3O70137 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Alx3O70137 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Alx3O70137 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Alx3O70137 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.99□□□□□ -0.17
Alx3O70137 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Alx3O70137 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Alx3O70137 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Alx3O70137 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx3O70137 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx3O70137 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx3O70137 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.98□□□□□ -0.17
Alx3O70137 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx3O70137 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx3O70137 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Alx3O70137 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx3O70137 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.98□□□□□ -0.17
Alx3O70137 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.98□□□□□ -0.17
Alx3O70137 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx3O70137 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx3O70137 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Alx3O70137 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx3O70137 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx3O70137 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Alx3O70137 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Alx3O70137 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Alx3O70137 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Alx3O70137 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx3O70137 Gm12106-201ENSMUST00000116006 1200 ntBASIC13.98□□□□□ -0.17
Alx3O70137 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx3O70137 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx3O70137 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.98□□□□□ -0.17
Alx3O70137 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx3O70137 Gm27742-201ENSMUST00000184667 60 ntBASIC13.98□□□□□ -0.17
Alx3O70137 Gm37319-201ENSMUST00000193500 636 ntBASIC13.98□□□□□ -0.17
Alx3O70137 Gm44454-201ENSMUST00000198541 138 ntBASIC13.98□□□□□ -0.17
Alx3O70137 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Alx3O70137 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.98□□□□□ -0.17
Alx3O70137 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx3O70137 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx3O70137 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Alx3O70137 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms