Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rdh5O55240 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.55□□□□□ -0.08
Rdh5O55240 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.55□□□□□ -0.08
Rdh5O55240 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rdh5O55240 BC037039-201ENSMUST00000192003 2205 ntBASIC14.55□□□□□ -0.08
Rdh5O55240 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rdh5O55240 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rdh5O55240 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rdh5O55240 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rdh5O55240 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rdh5O55240 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rdh5O55240 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rdh5O55240 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rdh5O55240 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rdh5O55240 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rdh5O55240 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rdh5O55240 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rdh5O55240 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.54□□□□□ -0.08
Rdh5O55240 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.54□□□□□ -0.08
Rdh5O55240 Gm27646-201ENSMUST00000183989 110 ntBASIC14.54□□□□□ -0.08
Rdh5O55240 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rdh5O55240 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.54□□□□□ -0.08
Rdh5O55240 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.54□□□□□ -0.08
Rdh5O55240 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.54□□□□□ -0.08
Rdh5O55240 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rdh5O55240 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rdh5O55240 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rdh5O55240 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rdh5O55240 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rdh5O55240 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rdh5O55240 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rdh5O55240 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rdh5O55240 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.54□□□□□ -0.08
Rdh5O55240 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rdh5O55240 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.54□□□□□ -0.08
Rdh5O55240 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rdh5O55240 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rdh5O55240 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rdh5O55240 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.54□□□□□ -0.08
Rdh5O55240 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rdh5O55240 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rdh5O55240 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Rdh5O55240 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Rdh5O55240 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Rdh5O55240 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rdh5O55240 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rdh5O55240 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rdh5O55240 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rdh5O55240 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rdh5O55240 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.53□□□□□ -0.08
Rdh5O55240 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rdh5O55240 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rdh5O55240 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rdh5O55240 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rdh5O55240 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rdh5O55240 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rdh5O55240 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rdh5O55240 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rdh5O55240 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rdh5O55240 Gm13418-201ENSMUST00000119097 944 ntBASIC14.53□□□□□ -0.08
Rdh5O55240 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Rdh5O55240 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rdh5O55240 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.53□□□□□ -0.08
Rdh5O55240 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
Rdh5O55240 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.53□□□□□ -0.08
Rdh5O55240 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.53□□□□□ -0.08
Rdh5O55240 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.53□□□□□ -0.08
Rdh5O55240 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.53□□□□□ -0.08
Rdh5O55240 Gm6296-201ENSMUST00000222599 943 ntBASIC14.53□□□□□ -0.08
Rdh5O55240 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rdh5O55240 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rdh5O55240 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rdh5O55240 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rdh5O55240 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
Rdh5O55240 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rdh5O55240 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rdh5O55240 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rdh5O55240 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rdh5O55240 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rdh5O55240 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rdh5O55240 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.53□□□□□ -0.08
Rdh5O55240 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rdh5O55240 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rdh5O55240 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rdh5O55240 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rdh5O55240 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.52□□□□□ -0.08
Rdh5O55240 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rdh5O55240 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rdh5O55240 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rdh5O55240 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rdh5O55240 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rdh5O55240 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rdh5O55240 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rdh5O55240 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Rdh5O55240 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rdh5O55240 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rdh5O55240 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rdh5O55240 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.52□□□□□ -0.09
Rdh5O55240 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Rdh5O55240 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms