Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1bO55017 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.79□□□□□ -0.04
Cacna1bO55017 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1bO55017 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.79□□□□□ -0.04
Cacna1bO55017 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1bO55017 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1bO55017 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1bO55017 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1bO55017 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1bO55017 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1bO55017 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cacna1bO55017 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1bO55017 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1bO55017 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1bO55017 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cacna1bO55017 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1bO55017 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.79□□□□□ -0.04
Cacna1bO55017 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1bO55017 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1bO55017 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1bO55017 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1bO55017 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
Cacna1bO55017 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.78□□□□□ -0.04
Cacna1bO55017 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.78□□□□□ -0.04
Cacna1bO55017 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1bO55017 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1bO55017 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1bO55017 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1bO55017 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1bO55017 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Cacna1bO55017 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1bO55017 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1bO55017 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.78□□□□□ -0.04
Cacna1bO55017 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1bO55017 Gm44855-201ENSMUST00000205725 362 ntBASIC14.78□□□□□ -0.04
Cacna1bO55017 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.78□□□□□ -0.04
Cacna1bO55017 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1bO55017 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1bO55017 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cacna1bO55017 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.78□□□□□ -0.04
Cacna1bO55017 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1bO55017 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1bO55017 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1bO55017 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cacna1bO55017 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1bO55017 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1bO55017 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1bO55017 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1bO55017 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1bO55017 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1bO55017 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cacna1bO55017 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cacna1bO55017 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.77□□□□□ -0.04
Cacna1bO55017 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cacna1bO55017 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.77□□□□□ -0.04
Cacna1bO55017 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cacna1bO55017 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Cacna1bO55017 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.77□□□□□ -0.04
Cacna1bO55017 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.77□□□□□ -0.04
Cacna1bO55017 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cacna1bO55017 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.77□□□□□ -0.04
Cacna1bO55017 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.77□□□□□ -0.04
Cacna1bO55017 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cacna1bO55017 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cacna1bO55017 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cacna1bO55017 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cacna1bO55017 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cacna1bO55017 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacna1bO55017 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cacna1bO55017 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacna1bO55017 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacna1bO55017 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Cacna1bO55017 Mir7684-201ENSMUST00000183858 60 ntBASIC14.77□□□□□ -0.05
Cacna1bO55017 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Cacna1bO55017 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Cacna1bO55017 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
Cacna1bO55017 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.77□□□□□ -0.05
Cacna1bO55017 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacna1bO55017 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacna1bO55017 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacna1bO55017 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacna1bO55017 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacna1bO55017 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cacna1bO55017 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cacna1bO55017 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Cacna1bO55017 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1bO55017 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1bO55017 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1bO55017 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1bO55017 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1bO55017 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1bO55017 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1bO55017 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.76□□□□□ -0.05
Cacna1bO55017 Gm18049-201ENSMUST00000208909 581 ntBASIC14.76□□□□□ -0.05
Cacna1bO55017 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1bO55017 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cacna1bO55017 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Cacna1bO55017 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1bO55017 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1bO55017 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms