Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Kcnu1O54982 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnu1O54982 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnu1O54982 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnu1O54982 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Kcnu1O54982 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnu1O54982 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnu1O54982 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnu1O54982 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.35■□□□□ 0.21
Kcnu1O54982 Gm21362-201ENSMUST00000194272 928 ntBASIC16.35■□□□□ 0.21
Kcnu1O54982 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.35■□□□□ 0.21
Kcnu1O54982 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnu1O54982 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnu1O54982 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnu1O54982 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
Kcnu1O54982 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.35■□□□□ 0.21
Kcnu1O54982 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnu1O54982 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Kcnu1O54982 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnu1O54982 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnu1O54982 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Kcnu1O54982 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnu1O54982 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnu1O54982 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnu1O54982 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnu1O54982 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.35■□□□□ 0.21
Kcnu1O54982 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Kcnu1O54982 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Kcnu1O54982 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Kcnu1O54982 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Kcnu1O54982 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Kcnu1O54982 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Kcnu1O54982 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Kcnu1O54982 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Kcnu1O54982 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Kcnu1O54982 Gm8318-201ENSMUST00000182954 872 ntBASIC16.34■□□□□ 0.21
Kcnu1O54982 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.34■□□□□ 0.21
Kcnu1O54982 Gm34391-201ENSMUST00000203706 907 ntBASIC16.34■□□□□ 0.21
Kcnu1O54982 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.34■□□□□ 0.21
Kcnu1O54982 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.34■□□□□ 0.21
Kcnu1O54982 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.34■□□□□ 0.21
Kcnu1O54982 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.34■□□□□ 0.21
Kcnu1O54982 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Kcnu1O54982 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.34■□□□□ 0.21
Kcnu1O54982 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.34■□□□□ 0.21
Kcnu1O54982 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Kcnu1O54982 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Kcnu1O54982 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.34■□□□□ 0.21
Kcnu1O54982 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Kcnu1O54982 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Kcnu1O54982 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Kcnu1O54982 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Kcnu1O54982 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Kcnu1O54982 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.34■□□□□ 0.21
Kcnu1O54982 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Kcnu1O54982 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Kcnu1O54982 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Kcnu1O54982 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Kcnu1O54982 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Kcnu1O54982 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Kcnu1O54982 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Kcnu1O54982 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Kcnu1O54982 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Kcnu1O54982 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Kcnu1O54982 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.33■□□□□ 0.2
Kcnu1O54982 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Kcnu1O54982 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.33■□□□□ 0.2
Kcnu1O54982 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Kcnu1O54982 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Kcnu1O54982 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Kcnu1O54982 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Kcnu1O54982 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.33■□□□□ 0.2
Kcnu1O54982 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.33■□□□□ 0.2
Kcnu1O54982 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.33■□□□□ 0.2
Kcnu1O54982 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.33■□□□□ 0.2
Kcnu1O54982 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Kcnu1O54982 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.33■□□□□ 0.2
Kcnu1O54982 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Kcnu1O54982 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Kcnu1O54982 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Kcnu1O54982 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Kcnu1O54982 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Kcnu1O54982 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Kcnu1O54982 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Kcnu1O54982 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Kcnu1O54982 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Kcnu1O54982 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Kcnu1O54982 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Kcnu1O54982 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Kcnu1O54982 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Kcnu1O54982 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Kcnu1O54982 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.32■□□□□ 0.2
Kcnu1O54982 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Kcnu1O54982 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Kcnu1O54982 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Kcnu1O54982 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Kcnu1O54982 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Kcnu1O54982 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Kcnu1O54982 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Kcnu1O54982 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms