Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cl1O35188 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cx3cl1O35188 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cl1O35188 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
Cx3cl1O35188 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cl1O35188 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cl1O35188 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cl1O35188 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cl1O35188 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cl1O35188 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Cx3cl1O35188 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.43□□□□□ -0.1
Cx3cl1O35188 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.43□□□□□ -0.1
Cx3cl1O35188 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cx3cl1O35188 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cx3cl1O35188 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cx3cl1O35188 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cx3cl1O35188 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cx3cl1O35188 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cx3cl1O35188 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cx3cl1O35188 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cx3cl1O35188 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cx3cl1O35188 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cx3cl1O35188 Mir5126-201ENSMUST00000175513 77 ntBASIC14.42□□□□□ -0.1
Cx3cl1O35188 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cx3cl1O35188 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cx3cl1O35188 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.42□□□□□ -0.1
Cx3cl1O35188 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cx3cl1O35188 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cx3cl1O35188 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cx3cl1O35188 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.42□□□□□ -0.1
Cx3cl1O35188 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cx3cl1O35188 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cx3cl1O35188 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cx3cl1O35188 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cx3cl1O35188 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cx3cl1O35188 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cx3cl1O35188 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cx3cl1O35188 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cx3cl1O35188 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cx3cl1O35188 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cx3cl1O35188 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.41□□□□□ -0.1
Cx3cl1O35188 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cx3cl1O35188 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cx3cl1O35188 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cx3cl1O35188 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cx3cl1O35188 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cx3cl1O35188 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cx3cl1O35188 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Cx3cl1O35188 Gm12350-201ENSMUST00000121208 462 ntBASIC14.41□□□□□ -0.1
Cx3cl1O35188 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cx3cl1O35188 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cx3cl1O35188 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.41□□□□□ -0.1
Cx3cl1O35188 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.41□□□□□ -0.1
Cx3cl1O35188 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cx3cl1O35188 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cx3cl1O35188 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cx3cl1O35188 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Cx3cl1O35188 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cx3cl1O35188 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cx3cl1O35188 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cx3cl1O35188 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Cx3cl1O35188 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cx3cl1O35188 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cx3cl1O35188 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cx3cl1O35188 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cx3cl1O35188 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cx3cl1O35188 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cx3cl1O35188 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cx3cl1O35188 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms