Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Alx4O35137 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Alx4O35137 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Alx4O35137 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Alx4O35137 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Alx4O35137 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Alx4O35137 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Alx4O35137 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Alx4O35137 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Alx4O35137 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Alx4O35137 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Alx4O35137 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.7□□□□□ -0.22
Alx4O35137 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Alx4O35137 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Alx4O35137 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Alx4O35137 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Alx4O35137 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Alx4O35137 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Alx4O35137 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Alx4O35137 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.69□□□□□ -0.22
Alx4O35137 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Alx4O35137 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Alx4O35137 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Alx4O35137 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Alx4O35137 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Alx4O35137 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.69□□□□□ -0.22
Alx4O35137 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.69□□□□□ -0.22
Alx4O35137 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.69□□□□□ -0.22
Alx4O35137 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Alx4O35137 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Alx4O35137 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Alx4O35137 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Alx4O35137 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Alx4O35137 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Alx4O35137 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Alx4O35137 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Alx4O35137 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Alx4O35137 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.69□□□□□ -0.22
Alx4O35137 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Alx4O35137 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Alx4O35137 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Alx4O35137 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Alx4O35137 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Alx4O35137 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Alx4O35137 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Alx4O35137 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Alx4O35137 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Alx4O35137 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Alx4O35137 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Alx4O35137 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Alx4O35137 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Alx4O35137 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Alx4O35137 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx4O35137 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Alx4O35137 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Alx4O35137 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Alx4O35137 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx4O35137 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx4O35137 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.68□□□□□ -0.22
Alx4O35137 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx4O35137 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Alx4O35137 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.68□□□□□ -0.22
Alx4O35137 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Alx4O35137 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx4O35137 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.68□□□□□ -0.22
Alx4O35137 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx4O35137 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx4O35137 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Alx4O35137 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx4O35137 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx4O35137 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx4O35137 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.68□□□□□ -0.22
Alx4O35137 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx4O35137 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Alx4O35137 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx4O35137 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Alx4O35137 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.67□□□□□ -0.22
Alx4O35137 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Alx4O35137 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Alx4O35137 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx4O35137 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx4O35137 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx4O35137 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Alx4O35137 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Alx4O35137 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx4O35137 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx4O35137 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Alx4O35137 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Alx4O35137 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Alx4O35137 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Alx4O35137 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.67□□□□□ -0.22
Alx4O35137 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Alx4O35137 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.67□□□□□ -0.22
Alx4O35137 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Alx4O35137 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.67□□□□□ -0.22
Alx4O35137 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.67□□□□□ -0.22
Alx4O35137 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Alx4O35137 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Alx4O35137 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx4O35137 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms