Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.94■□□□□ 0.14
Ebf3O08791 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf3O08791 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf3O08791 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf3O08791 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf3O08791 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf3O08791 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf3O08791 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf3O08791 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf3O08791 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf3O08791 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.94■□□□□ 0.14
Ebf3O08791 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf3O08791 Gm6257-201ENSMUST00000163864 910 ntBASIC15.94■□□□□ 0.14
Ebf3O08791 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf3O08791 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.94■□□□□ 0.14
Ebf3O08791 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.94■□□□□ 0.14
Ebf3O08791 Gm19164-201ENSMUST00000210667 640 ntBASIC15.94■□□□□ 0.14
Ebf3O08791 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Ebf3O08791 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.94■□□□□ 0.14
Ebf3O08791 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.94■□□□□ 0.14
Ebf3O08791 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf3O08791 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Ebf3O08791 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf3O08791 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf3O08791 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf3O08791 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf3O08791 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.94■□□□□ 0.14
Ebf3O08791 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf3O08791 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.94■□□□□ 0.14
Ebf3O08791 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Ebf3O08791 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf3O08791 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf3O08791 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf3O08791 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.93■□□□□ 0.14
Ebf3O08791 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf3O08791 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf3O08791 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf3O08791 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf3O08791 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf3O08791 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.93■□□□□ 0.14
Ebf3O08791 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.93■□□□□ 0.14
Ebf3O08791 Gm44492-201ENSMUST00000197012 141 ntBASIC15.93■□□□□ 0.14
Ebf3O08791 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.93■□□□□ 0.14
Ebf3O08791 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf3O08791 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf3O08791 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf3O08791 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Ebf3O08791 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf3O08791 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf3O08791 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf3O08791 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Ebf3O08791 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Ebf3O08791 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf3O08791 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf3O08791 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf3O08791 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.92■□□□□ 0.14
Ebf3O08791 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf3O08791 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf3O08791 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf3O08791 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf3O08791 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
Ebf3O08791 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf3O08791 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Ebf3O08791 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf3O08791 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.92■□□□□ 0.14
Ebf3O08791 Gm14701-201ENSMUST00000117156 348 ntBASIC15.92■□□□□ 0.14
Ebf3O08791 Gm18489-201ENSMUST00000172565 551 ntBASIC15.92■□□□□ 0.14
Ebf3O08791 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.92■□□□□ 0.14
Ebf3O08791 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf3O08791 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf3O08791 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf3O08791 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf3O08791 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf3O08791 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.92■□□□□ 0.14
Ebf3O08791 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf3O08791 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf3O08791 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf3O08791 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf3O08791 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ebf3O08791 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Ebf3O08791 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf3O08791 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf3O08791 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf3O08791 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf3O08791 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf3O08791 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf3O08791 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Ebf3O08791 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Ebf3O08791 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf3O08791 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf3O08791 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf3O08791 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf3O08791 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf3O08791 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Ebf3O08791 Gm13597-201ENSMUST00000121239 375 ntBASIC15.91■□□□□ 0.14
Ebf3O08791 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Ebf3O08791 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ebf3O08791 Auts2-212ENSMUST00000178555 309 ntBASIC15.91■□□□□ 0.14
Ebf3O08791 Gm17968-201ENSMUST00000194902 784 ntBASIC15.91■□□□□ 0.14
Ebf3O08791 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms