Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Raet1bO08603 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Raet1bO08603 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.62□□□□□ -0.23
Raet1bO08603 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Raet1bO08603 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Raet1bO08603 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Raet1bO08603 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Raet1bO08603 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Raet1bO08603 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Raet1bO08603 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Raet1bO08603 Gm24589-201ENSMUST00000116692 94 ntBASIC13.62□□□□□ -0.23
Raet1bO08603 Gm13418-201ENSMUST00000119097 944 ntBASIC13.62□□□□□ -0.23
Raet1bO08603 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Raet1bO08603 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.62□□□□□ -0.23
Raet1bO08603 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.62□□□□□ -0.23
Raet1bO08603 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Raet1bO08603 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Raet1bO08603 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.62□□□□□ -0.23
Raet1bO08603 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.62□□□□□ -0.23
Raet1bO08603 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Raet1bO08603 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Raet1bO08603 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Raet1bO08603 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Raet1bO08603 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Raet1bO08603 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Raet1bO08603 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Raet1bO08603 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Raet1bO08603 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Raet1bO08603 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Raet1bO08603 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Raet1bO08603 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Raet1bO08603 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Raet1bO08603 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Raet1bO08603 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.61□□□□□ -0.23
Raet1bO08603 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.61□□□□□ -0.23
Raet1bO08603 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.61□□□□□ -0.23
Raet1bO08603 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Raet1bO08603 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Raet1bO08603 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.61□□□□□ -0.23
Raet1bO08603 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Raet1bO08603 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Raet1bO08603 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Raet1bO08603 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Raet1bO08603 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Raet1bO08603 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Raet1bO08603 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Raet1bO08603 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Raet1bO08603 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Raet1bO08603 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Raet1bO08603 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Raet1bO08603 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Raet1bO08603 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Raet1bO08603 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Raet1bO08603 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Raet1bO08603 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Raet1bO08603 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Raet1bO08603 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.6□□□□□ -0.23
Raet1bO08603 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.6□□□□□ -0.23
Raet1bO08603 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.6□□□□□ -0.23
Raet1bO08603 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Raet1bO08603 Gm17971-201ENSMUST00000190239 806 ntBASIC13.6□□□□□ -0.23
Raet1bO08603 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.6□□□□□ -0.23
Raet1bO08603 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.6□□□□□ -0.23
Raet1bO08603 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Raet1bO08603 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Raet1bO08603 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Raet1bO08603 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Raet1bO08603 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Raet1bO08603 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Raet1bO08603 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Raet1bO08603 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Raet1bO08603 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Raet1bO08603 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.6□□□□□ -0.23
Raet1bO08603 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Raet1bO08603 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Raet1bO08603 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Raet1bO08603 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms