Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trav13d-3J3QMG8 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-3J3QMG8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav13d-3J3QMG8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-3J3QMG8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-3J3QMG8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-3J3QMG8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-3J3QMG8 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav13d-3J3QMG8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-3J3QMG8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.5□□□□□ -0.25
Trav13d-3J3QMG8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-3J3QMG8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav13d-3J3QMG8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-3J3QMG8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-3J3QMG8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-3J3QMG8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-3J3QMG8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-3J3QMG8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-3J3QMG8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-3J3QMG8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav13d-3J3QMG8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-3J3QMG8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-3J3QMG8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13d-3J3QMG8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.49□□□□□ -0.25
Trav13d-3J3QMG8 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Gm7862-201ENSMUST00000121461 292 ntBASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Gm5864-201ENSMUST00000202263 970 ntBASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13d-3J3QMG8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms