Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna9G3X8Z7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Gm13418-201ENSMUST00000119097 944 ntBASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Chrna9G3X8Z7 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna9G3X8Z7 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Chrna9G3X8Z7 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.47■□□□□ 0.23
Chrna9G3X8Z7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna9G3X8Z7 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna9G3X8Z7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna9G3X8Z7 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna9G3X8Z7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna9G3X8Z7 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna9G3X8Z7 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.47■□□□□ 0.23
Chrna9G3X8Z7 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.47■□□□□ 0.23
Chrna9G3X8Z7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna9G3X8Z7 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna9G3X8Z7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna9G3X8Z7 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna9G3X8Z7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna9G3X8Z7 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna9G3X8Z7 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.47■□□□□ 0.23
Chrna9G3X8Z7 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.47■□□□□ 0.23
Chrna9G3X8Z7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna9G3X8Z7 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.47■□□□□ 0.23
Chrna9G3X8Z7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna9G3X8Z7 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna9G3X8Z7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna9G3X8Z7 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna9G3X8Z7 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Chrna9G3X8Z7 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna9G3X8Z7 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna9G3X8Z7 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna9G3X8Z7 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna9G3X8Z7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna9G3X8Z7 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna9G3X8Z7 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna9G3X8Z7 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna9G3X8Z7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna9G3X8Z7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna9G3X8Z7 Gm5682-201ENSMUST00000173402 505 ntBASIC16.46■□□□□ 0.23
Chrna9G3X8Z7 Gm10499-201ENSMUST00000174094 934 ntBASIC16.46■□□□□ 0.23
Chrna9G3X8Z7 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna9G3X8Z7 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.46■□□□□ 0.23
Chrna9G3X8Z7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna9G3X8Z7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna9G3X8Z7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
Chrna9G3X8Z7 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chrna9G3X8Z7 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chrna9G3X8Z7 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chrna9G3X8Z7 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Chrna9G3X8Z7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chrna9G3X8Z7 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.45■□□□□ 0.22
Chrna9G3X8Z7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms