Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm21722-201ENSMUST00000190153 696 ntBASIC21.3■■□□□ 1
Hfm1D3Z4R1 Gm28423-201ENSMUST00000190701 696 ntBASIC21.3■■□□□ 1
Hfm1D3Z4R1 Gm21899-201ENSMUST00000190745 696 ntBASIC21.3■■□□□ 1
Hfm1D3Z4R1 Gm21910-201ENSMUST00000191163 696 ntBASIC21.3■■□□□ 1
Hfm1D3Z4R1 Gm21849-201ENSMUST00000191571 696 ntBASIC21.3■■□□□ 1
Hfm1D3Z4R1 Gm28678-201ENSMUST00000191593 696 ntBASIC21.3■■□□□ 1
Hfm1D3Z4R1 Gm20910-201ENSMUST00000193268 696 ntBASIC21.3■■□□□ 1
Hfm1D3Z4R1 Gm21871-201ENSMUST00000194621 696 ntBASIC21.3■■□□□ 1
Hfm1D3Z4R1 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC21.3■■□□□ 1
Hfm1D3Z4R1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hfm1D3Z4R1 Gm7292-201ENSMUST00000194706 2527 ntBASIC21.3■■□□□ 1
Hfm1D3Z4R1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Hfm1D3Z4R1 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
Hfm1D3Z4R1 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hfm1D3Z4R1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Hfm1D3Z4R1 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Hfm1D3Z4R1 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hfm1D3Z4R1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hfm1D3Z4R1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Hfm1D3Z4R1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hfm1D3Z4R1 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hfm1D3Z4R1 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hfm1D3Z4R1 Gm11478-201ENSMUST00000117851 599 ntBASIC21.29■■□□□ 1
Hfm1D3Z4R1 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Hfm1D3Z4R1 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC21.29■■□□□ 1
Hfm1D3Z4R1 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC21.29■■□□□ 1
Hfm1D3Z4R1 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC21.29■■□□□ 1
Hfm1D3Z4R1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC21.29■■□□□ 1
Hfm1D3Z4R1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC21.29■■□□□ 1
Hfm1D3Z4R1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Hfm1D3Z4R1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC21.29■■□□□ 1
Hfm1D3Z4R1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hfm1D3Z4R1 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC21.29■■□□□ 1
Hfm1D3Z4R1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hfm1D3Z4R1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hfm1D3Z4R1 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC21.29■■□□□ 1
Hfm1D3Z4R1 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hfm1D3Z4R1 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hfm1D3Z4R1 AC164565.1-201ENSMUST00000217520 1484 ntBASIC21.28■■□□□ 1
Hfm1D3Z4R1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hfm1D3Z4R1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC21.28■■□□□ 1
Hfm1D3Z4R1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.28■■□□□ 1
Hfm1D3Z4R1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hfm1D3Z4R1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hfm1D3Z4R1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hfm1D3Z4R1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
Hfm1D3Z4R1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hfm1D3Z4R1 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hfm1D3Z4R1 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC21.28■■□□□ 1
Hfm1D3Z4R1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hfm1D3Z4R1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Hfm1D3Z4R1 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC21.28■■□□□ 1
Hfm1D3Z4R1 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC21.28■■□□□ 1
Hfm1D3Z4R1 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC21.28■■□□□ 1
Hfm1D3Z4R1 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC21.28■■□□□ 1
Hfm1D3Z4R1 Gm9908-201ENSMUST00000211534 448 ntBASIC21.28■■□□□ 1
Hfm1D3Z4R1 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Hfm1D3Z4R1 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC21.28■■□□□ 1
Hfm1D3Z4R1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hfm1D3Z4R1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hfm1D3Z4R1 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hfm1D3Z4R1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hfm1D3Z4R1 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hfm1D3Z4R1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hfm1D3Z4R1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Hfm1D3Z4R1 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
Hfm1D3Z4R1 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Hfm1D3Z4R1 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hfm1D3Z4R1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hfm1D3Z4R1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hfm1D3Z4R1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hfm1D3Z4R1 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC21.27■■□□□ 1
Hfm1D3Z4R1 AC125350.2-201ENSMUST00000224737 727 ntBASIC21.27■■□□□ 1
Hfm1D3Z4R1 AC149294.4-201ENSMUST00000227870 882 ntBASIC21.27■■□□□ 1
Hfm1D3Z4R1 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hfm1D3Z4R1 Gm15823-201ENSMUST00000064305 670 ntBASIC21.27■■□□□ 1
Hfm1D3Z4R1 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hfm1D3Z4R1 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hfm1D3Z4R1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hfm1D3Z4R1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hfm1D3Z4R1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Hfm1D3Z4R1 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC21.27■□□□□ 0.99
Hfm1D3Z4R1 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Hfm1D3Z4R1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Hfm1D3Z4R1 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC21.26■□□□□ 0.99
Hfm1D3Z4R1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Hfm1D3Z4R1 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC21.26■□□□□ 0.99
Hfm1D3Z4R1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hfm1D3Z4R1 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hfm1D3Z4R1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hfm1D3Z4R1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hfm1D3Z4R1 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hfm1D3Z4R1 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hfm1D3Z4R1 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hfm1D3Z4R1 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC21.26■□□□□ 0.99
Hfm1D3Z4R1 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC21.26■□□□□ 0.99
Hfm1D3Z4R1 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hfm1D3Z4R1 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Hfm1D3Z4R1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hfm1D3Z4R1 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms