Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.36□□□□□ -0.43
Chd6A3KFM7 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd6A3KFM7 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd6A3KFM7 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.36□□□□□ -0.43
Chd6A3KFM7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Chd6A3KFM7 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Gm28760-201ENSMUST00000185995 736 ntBASIC12.36□□□□□ -0.43
Chd6A3KFM7 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd6A3KFM7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd6A3KFM7 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd6A3KFM7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd6A3KFM7 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Chd6A3KFM7 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Chd6A3KFM7 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.35□□□□□ -0.43
Chd6A3KFM7 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Chd6A3KFM7 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.35□□□□□ -0.43
Chd6A3KFM7 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.35□□□□□ -0.43
Chd6A3KFM7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd6A3KFM7 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.35□□□□□ -0.43
Chd6A3KFM7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd6A3KFM7 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd6A3KFM7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Chd6A3KFM7 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.35□□□□□ -0.43
Chd6A3KFM7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd6A3KFM7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Chd6A3KFM7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd6A3KFM7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd6A3KFM7 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd6A3KFM7 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd6A3KFM7 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.35□□□□□ -0.43
Chd6A3KFM7 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chd6A3KFM7 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.35□□□□□ -0.43
Chd6A3KFM7 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.35□□□□□ -0.43
Chd6A3KFM7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Chd6A3KFM7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Chd6A3KFM7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd6A3KFM7 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chd6A3KFM7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd6A3KFM7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd6A3KFM7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd6A3KFM7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Chd6A3KFM7 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd6A3KFM7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Chd6A3KFM7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd6A3KFM7 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Chd6A3KFM7 Gm15678-201ENSMUST00000117573 960 ntBASIC12.34□□□□□ -0.43
Chd6A3KFM7 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd6A3KFM7 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.34□□□□□ -0.43
Chd6A3KFM7 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Chd6A3KFM7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.34□□□□□ -0.43
Chd6A3KFM7 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd6A3KFM7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd6A3KFM7 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd6A3KFM7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd6A3KFM7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd6A3KFM7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd6A3KFM7 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd6A3KFM7 Nsd1-205ENSMUST00000224693 852 ntBASIC12.34□□□□□ -0.43
Chd6A3KFM7 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd6A3KFM7 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd6A3KFM7 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.34□□□□□ -0.43
Chd6A3KFM7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd6A3KFM7 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd6A3KFM7 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd6A3KFM7 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Chd6A3KFM7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Chd6A3KFM7 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd6A3KFM7 Gm27572-201ENSMUST00000183702 255 ntBASIC12.33□□□□□ -0.44
Chd6A3KFM7 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Chd6A3KFM7 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chd6A3KFM7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd6A3KFM7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chd6A3KFM7 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Chd6A3KFM7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd6A3KFM7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms