Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a4A2AX52 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Gm12490-201ENSMUST00000120255 560 ntBASIC12.94□□□□□ -0.34
Col6a4A2AX52 Gm15693-201ENSMUST00000120470 637 ntBASIC12.94□□□□□ -0.34
Col6a4A2AX52 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a4A2AX52 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.93□□□□□ -0.34
Col6a4A2AX52 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.93□□□□□ -0.34
Col6a4A2AX52 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a4A2AX52 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a4A2AX52 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.93□□□□□ -0.34
Col6a4A2AX52 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col6a4A2AX52 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a4A2AX52 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col6a4A2AX52 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.92□□□□□ -0.34
Col6a4A2AX52 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a4A2AX52 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a4A2AX52 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col6a4A2AX52 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a4A2AX52 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a4A2AX52 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a4A2AX52 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col6a4A2AX52 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a4A2AX52 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a4A2AX52 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a4A2AX52 Gm6912-201ENSMUST00000117218 544 ntBASIC12.92□□□□□ -0.34
Col6a4A2AX52 Gm14127-201ENSMUST00000117906 678 ntBASIC12.92□□□□□ -0.34
Col6a4A2AX52 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col6a4A2AX52 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.92□□□□□ -0.34
Col6a4A2AX52 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a4A2AX52 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a4A2AX52 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Col6a4A2AX52 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col6a4A2AX52 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a4A2AX52 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a4A2AX52 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Col6a4A2AX52 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a4A2AX52 Gm6973-201ENSMUST00000117080 721 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms