Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc112A0AUP1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc112A0AUP1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc112A0AUP1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc112A0AUP1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc112A0AUP1 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Ccdc112A0AUP1 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc112A0AUP1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.55■□□□□ 0.4
Ccdc112A0AUP1 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc112A0AUP1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc112A0AUP1 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ccdc112A0AUP1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc112A0AUP1 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.55■□□□□ 0.4
Ccdc112A0AUP1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Ccdc112A0AUP1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc112A0AUP1 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc112A0AUP1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc112A0AUP1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc112A0AUP1 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.55■□□□□ 0.4
Ccdc112A0AUP1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc112A0AUP1 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc112A0AUP1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc112A0AUP1 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc112A0AUP1 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc112A0AUP1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ccdc112A0AUP1 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc112A0AUP1 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccdc112A0AUP1 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc112A0AUP1 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.54■□□□□ 0.4
Ccdc112A0AUP1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Ccdc112A0AUP1 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.54■□□□□ 0.4
Ccdc112A0AUP1 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.54■□□□□ 0.4
Ccdc112A0AUP1 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.54■□□□□ 0.4
Ccdc112A0AUP1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc112A0AUP1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccdc112A0AUP1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc112A0AUP1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.54■□□□□ 0.4
Ccdc112A0AUP1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc112A0AUP1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc112A0AUP1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc112A0AUP1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccdc112A0AUP1 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc112A0AUP1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc112A0AUP1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Ccdc112A0AUP1 Grk6-207ENSMUST00000225925 2769 ntBASIC17.52■□□□□ 0.4
Ccdc112A0AUP1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc112A0AUP1 Efs-202ENSMUST00000227037 2540 ntBASIC17.52■□□□□ 0.4
Ccdc112A0AUP1 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc112A0AUP1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc112A0AUP1 Gm4459-201ENSMUST00000118750 468 ntBASIC17.52■□□□□ 0.4
Ccdc112A0AUP1 Gm8344-201ENSMUST00000119813 856 ntBASIC17.52■□□□□ 0.4
Ccdc112A0AUP1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc112A0AUP1 Gm12497-201ENSMUST00000138778 237 ntBASIC17.52■□□□□ 0.4
Ccdc112A0AUP1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.52■□□□□ 0.4
Ccdc112A0AUP1 Gm27867-201ENSMUST00000184778 125 ntBASIC17.52■□□□□ 0.4
Ccdc112A0AUP1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.52■□□□□ 0.4
Ccdc112A0AUP1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms