Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.64■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atg4a-psA0A0G2JFS9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Celf4-206ENSMUST00000224553 1729 ntBASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Gm2651-201ENSMUST00000203560 838 ntBASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Mzt1-203ENSMUST00000227948 952 ntBASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atg4a-psA0A0G2JFS9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.62■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.62■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.62■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.62■□□□□ 0.57
Atg4a-psA0A0G2JFS9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.62■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.62■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atg4a-psA0A0G2JFS9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms