Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Gm5587-201ENSMUST00000206270 674 ntBASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7-1A0A0G2JEV5 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Gm11950-201ENSMUST00000121615 838 ntBASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7-1A0A0G2JEV5 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav7-1A0A0G2JEV5 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-1A0A0G2JEV5 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav7-1A0A0G2JEV5 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-1A0A0G2JEV5 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-1A0A0G2JEV5 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav7-1A0A0G2JEV5 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-1A0A0G2JEV5 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-1A0A0G2JEV5 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trav7-1A0A0G2JEV5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trav7-1A0A0G2JEV5 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-1A0A0G2JEV5 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav7-1A0A0G2JEV5 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-1A0A0G2JEV5 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-1A0A0G2JEV5 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-1A0A0G2JEV5 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-1A0A0G2JEV5 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-1A0A0G2JEV5 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-1A0A0G2JEV5 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-1A0A0G2JEV5 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trav7-1A0A0G2JEV5 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav7-1A0A0G2JEV5 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Trav7-1A0A0G2JEV5 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav7-1A0A0G2JEV5 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trav7-1A0A0G2JEV5 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-1A0A0G2JEV5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-1A0A0G2JEV5 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-1A0A0G2JEV5 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-1A0A0G2JEV5 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-1A0A0G2JEV5 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-1A0A0G2JEV5 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-1A0A0G2JEV5 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-1A0A0G2JEV5 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav7-1A0A0G2JEV5 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav7-1A0A0G2JEV5 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms