Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm44357-201ENSMUST00000195897 142 ntBASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm19658-201ENSMUST00000196231 138 ntBASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm44367-201ENSMUST00000196836 138 ntBASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm44350-201ENSMUST00000197197 138 ntBASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm44390-201ENSMUST00000197533 144 ntBASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm44313-201ENSMUST00000198018 138 ntBASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm44486-201ENSMUST00000198508 138 ntBASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm44314-201ENSMUST00000199263 138 ntBASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm44394-201ENSMUST00000199558 138 ntBASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm44484-201ENSMUST00000199873 138 ntBASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm44466-201ENSMUST00000200264 138 ntBASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm44359-201ENSMUST00000200671 138 ntBASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.46□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm7862-201ENSMUST00000121461 292 ntBASIC11.46□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm43514-201ENSMUST00000198852 424 ntBASIC11.46□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.46□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Gm7506-201ENSMUST00000207758 815 ntBASIC11.46□□□□□ -0.57
Trbv13-1A0A0B4J1P8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.46□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.46□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-1A0A0B4J1P8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-1A0A0B4J1P8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv13-1A0A0B4J1P8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.45□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.45□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.45□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv13-1A0A0B4J1P8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.45□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv13-1A0A0B4J1P8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms