Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm6728-201ENSMUST00000178117 1065 ntBASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm3272-201ENSMUST00000181181 1229 ntBASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm29707-201ENSMUST00000196325 491 ntBASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm10566-201ENSMUST00000086739 996 ntBASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6n-6A0A075B6B2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.48□□□□□ -0.57
Trav6n-6A0A075B6B2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6n-6A0A075B6B2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Trav6n-6A0A075B6B2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Trav6n-6A0A075B6B2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav6n-6A0A075B6B2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6n-6A0A075B6B2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm37722-201ENSMUST00000193757 208 ntBASIC11.48□□□□□ -0.57
Trav6n-6A0A075B6B2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6n-6A0A075B6B2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6n-6A0A075B6B2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6n-6A0A075B6B2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6n-6A0A075B6B2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6n-6A0A075B6B2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6n-6A0A075B6B2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6n-6A0A075B6B2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.48□□□□□ -0.57
Trav6n-6A0A075B6B2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6n-6A0A075B6B2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6n-6A0A075B6B2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Trav6n-6A0A075B6B2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms