Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.22□□□□□ -0.45
Trav17A0A075B655 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav17A0A075B655 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav17A0A075B655 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.21□□□□□ -0.45
Trav17A0A075B655 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.21□□□□□ -0.45
Trav17A0A075B655 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav17A0A075B655 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav17A0A075B655 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav17A0A075B655 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav17A0A075B655 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav17A0A075B655 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav17A0A075B655 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav17A0A075B655 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav17A0A075B655 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav17A0A075B655 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.21□□□□□ -0.46
Trav17A0A075B655 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav17A0A075B655 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav17A0A075B655 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav17A0A075B655 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav17A0A075B655 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav17A0A075B655 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav17A0A075B655 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav17A0A075B655 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.19□□□□□ -0.46
Trav17A0A075B655 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms