Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16A0A075B653 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16A0A075B653 Mir5122-201ENSMUST00000175004 89 ntBASIC11.9□□□□□ -0.5
Trav16A0A075B653 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16A0A075B653 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.9□□□□□ -0.5
Trav16A0A075B653 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.9□□□□□ -0.5
Trav16A0A075B653 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16A0A075B653 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16A0A075B653 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16A0A075B653 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16A0A075B653 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Trav16A0A075B653 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16A0A075B653 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16A0A075B653 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16A0A075B653 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16A0A075B653 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16A0A075B653 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16A0A075B653 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16A0A075B653 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav16A0A075B653 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Trav16A0A075B653 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.89□□□□□ -0.51
Trav16A0A075B653 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav16A0A075B653 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Gm10653-202ENSMUST00000139570 835 ntBASIC11.88□□□□□ -0.51
Trav16A0A075B653 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.88□□□□□ -0.51
Trav16A0A075B653 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav16A0A075B653 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Trav16A0A075B653 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav16A0A075B653 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms