Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Gm27704-201ENSMUST00000185094 107 ntBASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Gm44454-201ENSMUST00000198541 138 ntBASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-4A0A075B652 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-4A0A075B652 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-4A0A075B652 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms