Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gm6623-201ENSMUST00000173570 544 ntBASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.06□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gm9013-201ENSMUST00000132939 882 ntBASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gm25406-201ENSMUST00000157599 105 ntBASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms