Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav7n-4A0A075B620 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7n-4A0A075B620 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7n-4A0A075B620 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Trav7n-4A0A075B620 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7n-4A0A075B620 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Trav7n-4A0A075B620 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7n-4A0A075B620 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7n-4A0A075B620 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7n-4A0A075B620 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7n-4A0A075B620 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7n-4A0A075B620 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7n-4A0A075B620 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Gm11336-201ENSMUST00000118168 334 ntBASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms