Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16d-dv11A0A075B617 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Timm23-208ENSMUST00000226683 750 ntBASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16d-dv11A0A075B617 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms