Protein–RNA interactions for Protein: T1NXB5

Vstm4, V-set and transmembrane domain-containing protein 4, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vstm4T1NXB5 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Vstm4T1NXB5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vstm4T1NXB5 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vstm4T1NXB5 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vstm4T1NXB5 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vstm4T1NXB5 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vstm4T1NXB5 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vstm4T1NXB5 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vstm4T1NXB5 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vstm4T1NXB5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vstm4T1NXB5 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vstm4T1NXB5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vstm4T1NXB5 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vstm4T1NXB5 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vstm4T1NXB5 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Vstm4T1NXB5 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vstm4T1NXB5 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vstm4T1NXB5 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vstm4T1NXB5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vstm4T1NXB5 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vstm4T1NXB5 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.67■□□□□ 0.26
Vstm4T1NXB5 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.67■□□□□ 0.26
Vstm4T1NXB5 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vstm4T1NXB5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vstm4T1NXB5 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vstm4T1NXB5 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vstm4T1NXB5 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.67■□□□□ 0.26
Vstm4T1NXB5 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vstm4T1NXB5 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.67■□□□□ 0.26
Vstm4T1NXB5 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vstm4T1NXB5 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.66■□□□□ 0.26
Vstm4T1NXB5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Gm8825-201ENSMUST00000182565 998 ntBASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Gm4518-201ENSMUST00000182638 718 ntBASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.66■□□□□ 0.26
Vstm4T1NXB5 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vstm4T1NXB5 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vstm4T1NXB5 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vstm4T1NXB5 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.65■□□□□ 0.26
Vstm4T1NXB5 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Vstm4T1NXB5 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vstm4T1NXB5 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Vstm4T1NXB5 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vstm4T1NXB5 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vstm4T1NXB5 Gm13312-201ENSMUST00000119631 718 ntBASIC16.65■□□□□ 0.26
Vstm4T1NXB5 Gm12134-201ENSMUST00000122109 520 ntBASIC16.65■□□□□ 0.26
Vstm4T1NXB5 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vstm4T1NXB5 Gm5587-201ENSMUST00000206270 674 ntBASIC16.65■□□□□ 0.26
Vstm4T1NXB5 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.65■□□□□ 0.26
Vstm4T1NXB5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vstm4T1NXB5 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vstm4T1NXB5 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vstm4T1NXB5 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vstm4T1NXB5 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vstm4T1NXB5 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vstm4T1NXB5 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vstm4T1NXB5 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.65■□□□□ 0.26
Vstm4T1NXB5 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vstm4T1NXB5 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms