Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac6Q9Z2V5 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac6Q9Z2V5 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Hdac6Q9Z2V5 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac6Q9Z2V5 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac6Q9Z2V5 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.17■□□□□ 0.66
Hdac6Q9Z2V5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac6Q9Z2V5 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC19.17■□□□□ 0.66
Hdac6Q9Z2V5 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac6Q9Z2V5 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Hdac6Q9Z2V5 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Hdac6Q9Z2V5 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Hdac6Q9Z2V5 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Hdac6Q9Z2V5 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac6Q9Z2V5 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac6Q9Z2V5 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac6Q9Z2V5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Hdac6Q9Z2V5 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac6Q9Z2V5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac6Q9Z2V5 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.16■□□□□ 0.66
Hdac6Q9Z2V5 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac6Q9Z2V5 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac6Q9Z2V5 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC19.16■□□□□ 0.66
Hdac6Q9Z2V5 Gm7730-201ENSMUST00000212486 454 ntBASIC19.16■□□□□ 0.66
Hdac6Q9Z2V5 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac6Q9Z2V5 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac6Q9Z2V5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac6Q9Z2V5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac6Q9Z2V5 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac6Q9Z2V5 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC19.16■□□□□ 0.66
Hdac6Q9Z2V5 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac6Q9Z2V5 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Hdac6Q9Z2V5 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac6Q9Z2V5 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC19.15■□□□□ 0.66
Hdac6Q9Z2V5 Gm14026-201ENSMUST00000120625 1789 ntBASIC19.14■□□□□ 0.66
Hdac6Q9Z2V5 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac6Q9Z2V5 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac6Q9Z2V5 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.14■□□□□ 0.65
Hdac6Q9Z2V5 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Hdac6Q9Z2V5 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC19.14■□□□□ 0.65
Hdac6Q9Z2V5 Gm14767-201ENSMUST00000121559 586 ntBASIC19.14■□□□□ 0.65
Hdac6Q9Z2V5 Gm15593-201ENSMUST00000122085 1008 ntBASIC19.14■□□□□ 0.65
Hdac6Q9Z2V5 Gm15487-201ENSMUST00000122373 465 ntBASIC19.14■□□□□ 0.65
Hdac6Q9Z2V5 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Hdac6Q9Z2V5 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Hdac6Q9Z2V5 Klk2-ps-201ENSMUST00000205342 571 ntBASIC19.14■□□□□ 0.65
Hdac6Q9Z2V5 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC19.14■□□□□ 0.65
Hdac6Q9Z2V5 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac6Q9Z2V5 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac6Q9Z2V5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac6Q9Z2V5 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac6Q9Z2V5 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac6Q9Z2V5 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac6Q9Z2V5 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac6Q9Z2V5 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac6Q9Z2V5 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.14■□□□□ 0.65
Hdac6Q9Z2V5 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hdac6Q9Z2V5 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19.14■□□□□ 0.65
Hdac6Q9Z2V5 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC19.13■□□□□ 0.65
Hdac6Q9Z2V5 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hdac6Q9Z2V5 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hdac6Q9Z2V5 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Hdac6Q9Z2V5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hdac6Q9Z2V5 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hdac6Q9Z2V5 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hdac6Q9Z2V5 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hdac6Q9Z2V5 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hdac6Q9Z2V5 Gm7488-201ENSMUST00000117148 684 ntBASIC19.13■□□□□ 0.65
Hdac6Q9Z2V5 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hdac6Q9Z2V5 Gm14719-201ENSMUST00000121891 340 ntBASIC19.13■□□□□ 0.65
Hdac6Q9Z2V5 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC19.13■□□□□ 0.65
Hdac6Q9Z2V5 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms