Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 Gm44335-201ENSMUST00000196879 141 ntBASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 Gm44297-201ENSMUST00000198304 141 ntBASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 Gm44346-201ENSMUST00000198851 141 ntBASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Clcn5Q9WVD4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Gm17968-201ENSMUST00000194902 784 ntBASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Clcn5Q9WVD4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Gm13365-201ENSMUST00000121188 973 ntBASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Gm8825-201ENSMUST00000182565 998 ntBASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Gm4518-201ENSMUST00000182638 718 ntBASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Mir6404-201ENSMUST00000183699 94 ntBASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Gm7787-201ENSMUST00000216858 688 ntBASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Prob1-201ENSMUST00000097619 3021 ntBASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clcn5Q9WVD4 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms