Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trem1Q9JKE2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trem1Q9JKE2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Gm17661-201ENSMUST00000170317 270 ntBASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Gm27275-201ENSMUST00000184318 272 ntBASIC13.83□□□□□ -0.2
Trem1Q9JKE2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trem1Q9JKE2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trem1Q9JKE2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trem1Q9JKE2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trem1Q9JKE2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trem1Q9JKE2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trem1Q9JKE2 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.81□□□□□ -0.2
Trem1Q9JKE2 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.81□□□□□ -0.2
Trem1Q9JKE2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.81□□□□□ -0.2
Trem1Q9JKE2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trem1Q9JKE2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trem1Q9JKE2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trem1Q9JKE2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trem1Q9JKE2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trem1Q9JKE2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trem1Q9JKE2 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trem1Q9JKE2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trem1Q9JKE2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Trem1Q9JKE2 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Trem1Q9JKE2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trem1Q9JKE2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trem1Q9JKE2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trem1Q9JKE2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.81□□□□□ -0.2
Trem1Q9JKE2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trem1Q9JKE2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms