Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 Gm18766-201ENSMUST00000189811 808 ntBASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 Gm6745-201ENSMUST00000199216 526 ntBASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 Gm6218-201ENSMUST00000219812 628 ntBASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Nkx2-4Q9EQM3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-4Q9EQM3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-4Q9EQM3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-4Q9EQM3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Nkx2-4Q9EQM3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-4Q9EQM3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-4Q9EQM3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-4Q9EQM3 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.71■□□□□ 0.11
Nkx2-4Q9EQM3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-4Q9EQM3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-4Q9EQM3 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.71■□□□□ 0.11
Nkx2-4Q9EQM3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.71■□□□□ 0.11
Nkx2-4Q9EQM3 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.71■□□□□ 0.11
Nkx2-4Q9EQM3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-4Q9EQM3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.71■□□□□ 0.11
Nkx2-4Q9EQM3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-4Q9EQM3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-4Q9EQM3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-4Q9EQM3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx2-4Q9EQM3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Nkx2-4Q9EQM3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nkx2-4Q9EQM3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nkx2-4Q9EQM3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Nkx2-4Q9EQM3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nkx2-4Q9EQM3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Gm6912-201ENSMUST00000117218 544 ntBASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Gm23984-201ENSMUST00000157139 203 ntBASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx2-4Q9EQM3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-4Q9EQM3 Gm27680-201ENSMUST00000184192 160 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms