Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf1Q9EPU4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf1Q9EPU4 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Cpsf1Q9EPU4 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf1Q9EPU4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf1Q9EPU4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cpsf1Q9EPU4 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf1Q9EPU4 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf1Q9EPU4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf1Q9EPU4 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf1Q9EPU4 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf1Q9EPU4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf1Q9EPU4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf1Q9EPU4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf1Q9EPU4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 CT025626.1-201ENSMUST00000223735 1455 ntBASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Mir6956-201ENSMUST00000183598 62 ntBASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Gm25287-201ENSMUST00000103846 110 ntBASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Gm22918-201ENSMUST00000103855 110 ntBASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Gm18057-201ENSMUST00000208220 503 ntBASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 AC131187.1-201ENSMUST00000224567 809 ntBASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf1Q9EPU4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 Gm13233-201ENSMUST00000118760 1443 ntBASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 Gm13244-201ENSMUST00000118855 1446 ntBASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 AC158982.1-201ENSMUST00000228377 901 ntBASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf1Q9EPU4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Cpsf1Q9EPU4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf1Q9EPU4 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf1Q9EPU4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf1Q9EPU4 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf1Q9EPU4 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf1Q9EPU4 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf1Q9EPU4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Cpsf1Q9EPU4 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf1Q9EPU4 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf1Q9EPU4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf1Q9EPU4 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf1Q9EPU4 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf1Q9EPU4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cpsf1Q9EPU4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cpsf1Q9EPU4 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC21.02■□□□□ 0.95
Cpsf1Q9EPU4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Cpsf1Q9EPU4 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Cpsf1Q9EPU4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cpsf1Q9EPU4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
Cpsf1Q9EPU4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cpsf1Q9EPU4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Cpsf1Q9EPU4 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cpsf1Q9EPU4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Cpsf1Q9EPU4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms