Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm13186-201ENSMUST00000118031 316 ntBASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Gm38027-201ENSMUST00000192315 235 ntBASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Gm18115-201ENSMUST00000221209 621 ntBASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTRAFQ9CQE8 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Gm10602-201ENSMUST00000098239 609 ntBASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RTRAFQ9CQE8 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
RTRAFQ9CQE8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
RTRAFQ9CQE8 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms