Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Msh4Q99MT2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Msh4Q99MT2 AC161829.1-201ENSMUST00000220298 281 ntBASIC15□□□□□ -0.01
Msh4Q99MT2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Msh4Q99MT2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh4Q99MT2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh4Q99MT2 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15□□□□□ -0.01
Msh4Q99MT2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh4Q99MT2 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15□□□□□ -0.01
Msh4Q99MT2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Msh4Q99MT2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15□□□□□ -0.01
Msh4Q99MT2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Msh4Q99MT2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh4Q99MT2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh4Q99MT2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh4Q99MT2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Msh4Q99MT2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Msh4Q99MT2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh4Q99MT2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh4Q99MT2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.99□□□□□ -0.01
Msh4Q99MT2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msh4Q99MT2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Msh4Q99MT2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msh4Q99MT2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Msh4Q99MT2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msh4Q99MT2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msh4Q99MT2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Msh4Q99MT2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Msh4Q99MT2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.99□□□□□ -0.01
Msh4Q99MT2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.99□□□□□ -0.01
Msh4Q99MT2 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Msh4Q99MT2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Msh4Q99MT2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Msh4Q99MT2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Msh4Q99MT2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msh4Q99MT2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.99□□□□□ -0.01
Msh4Q99MT2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msh4Q99MT2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msh4Q99MT2 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.98□□□□□ -0.01
Msh4Q99MT2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Msh4Q99MT2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Gm8097-201ENSMUST00000117903 829 ntBASIC14.98□□□□□ -0.01
Msh4Q99MT2 Gm7862-201ENSMUST00000121461 292 ntBASIC14.98□□□□□ -0.01
Msh4Q99MT2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Gm18195-201ENSMUST00000207604 706 ntBASIC14.98□□□□□ -0.01
Msh4Q99MT2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh4Q99MT2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msh4Q99MT2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msh4Q99MT2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Msh4Q99MT2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msh4Q99MT2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.97□□□□□ -0.01
Msh4Q99MT2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Gm4535-201ENSMUST00000182274 558 ntBASIC14.97□□□□□ -0.01
Msh4Q99MT2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Gm44771-201ENSMUST00000206975 626 ntBASIC14.97□□□□□ -0.01
Msh4Q99MT2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Msh4Q99MT2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 116.3 ms