Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdk9Q99J95 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk9Q99J95 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Cdk9Q99J95 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk9Q99J95 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Cdk9Q99J95 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk9Q99J95 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk9Q99J95 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk9Q99J95 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk9Q99J95 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.55■□□□□ 0.08
Cdk9Q99J95 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk9Q99J95 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.55■□□□□ 0.08
Cdk9Q99J95 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk9Q99J95 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk9Q99J95 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk9Q99J95 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.55■□□□□ 0.08
Cdk9Q99J95 Gm18959-201ENSMUST00000208954 655 ntBASIC15.55■□□□□ 0.08
Cdk9Q99J95 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Cdk9Q99J95 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk9Q99J95 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk9Q99J95 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk9Q99J95 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk9Q99J95 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk9Q99J95 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdk9Q99J95 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk9Q99J95 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cdk9Q99J95 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cdk9Q99J95 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk9Q99J95 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk9Q99J95 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk9Q99J95 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Cdk9Q99J95 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.54■□□□□ 0.08
Cdk9Q99J95 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk9Q99J95 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk9Q99J95 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.54■□□□□ 0.08
Cdk9Q99J95 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk9Q99J95 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.54■□□□□ 0.08
Cdk9Q99J95 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk9Q99J95 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk9Q99J95 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk9Q99J95 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk9Q99J95 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk9Q99J95 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk9Q99J95 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk9Q99J95 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdk9Q99J95 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Cdk9Q99J95 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.54■□□□□ 0.08
Cdk9Q99J95 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.53■□□□□ 0.08
Cdk9Q99J95 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cdk9Q99J95 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdk9Q99J95 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.52■□□□□ 0.08
Cdk9Q99J95 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdk9Q99J95 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdk9Q99J95 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdk9Q99J95 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cdk9Q99J95 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdk9Q99J95 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Cdk9Q99J95 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms