Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smc1bQ920F6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smc1bQ920F6 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc1bQ920F6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc1bQ920F6 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc1bQ920F6 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc1bQ920F6 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc1bQ920F6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Smc1bQ920F6 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.72■□□□□ 0.43
Smc1bQ920F6 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.72■□□□□ 0.43
Smc1bQ920F6 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smc1bQ920F6 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.72■□□□□ 0.43
Smc1bQ920F6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc1bQ920F6 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc1bQ920F6 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc1bQ920F6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
Smc1bQ920F6 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc1bQ920F6 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc1bQ920F6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc1bQ920F6 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smc1bQ920F6 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc1bQ920F6 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc1bQ920F6 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc1bQ920F6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.71■□□□□ 0.43
Smc1bQ920F6 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc1bQ920F6 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc1bQ920F6 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc1bQ920F6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.71■□□□□ 0.43
Smc1bQ920F6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smc1bQ920F6 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc1bQ920F6 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc1bQ920F6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smc1bQ920F6 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc1bQ920F6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc1bQ920F6 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smc1bQ920F6 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Smc1bQ920F6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.71■□□□□ 0.43
Smc1bQ920F6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc1bQ920F6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.7■□□□□ 0.42
Smc1bQ920F6 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Gm13616-201ENSMUST00000120600 222 ntBASIC17.7■□□□□ 0.42
Smc1bQ920F6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.7■□□□□ 0.42
Smc1bQ920F6 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.7■□□□□ 0.42
Smc1bQ920F6 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.7■□□□□ 0.42
Smc1bQ920F6 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.7■□□□□ 0.42
Smc1bQ920F6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.7■□□□□ 0.42
Smc1bQ920F6 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.7■□□□□ 0.42
Smc1bQ920F6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smc1bQ920F6 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smc1bQ920F6 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Smc1bQ920F6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Smc1bQ920F6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms