Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Uhrf1Q8VDF2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Uhrf1Q8VDF2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Uhrf1Q8VDF2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Uhrf1Q8VDF2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Uhrf1Q8VDF2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Uhrf1Q8VDF2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Uhrf1Q8VDF2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Uhrf1Q8VDF2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Uhrf1Q8VDF2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Uhrf1Q8VDF2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Uhrf1Q8VDF2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Uhrf1Q8VDF2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Uhrf1Q8VDF2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.82■□□□□ 0.12
Uhrf1Q8VDF2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Uhrf1Q8VDF2 Gm6415-201ENSMUST00000118488 348 ntBASIC15.82■□□□□ 0.12
Uhrf1Q8VDF2 Gm11543-201ENSMUST00000120758 370 ntBASIC15.82■□□□□ 0.12
Uhrf1Q8VDF2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Uhrf1Q8VDF2 Gm16026-204ENSMUST00000162652 683 ntBASIC15.82■□□□□ 0.12
Uhrf1Q8VDF2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.82■□□□□ 0.12
Uhrf1Q8VDF2 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.82■□□□□ 0.12
Uhrf1Q8VDF2 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Uhrf1Q8VDF2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Uhrf1Q8VDF2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Uhrf1Q8VDF2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Uhrf1Q8VDF2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Uhrf1Q8VDF2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Uhrf1Q8VDF2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Uhrf1Q8VDF2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Uhrf1Q8VDF2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Uhrf1Q8VDF2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Uhrf1Q8VDF2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Uhrf1Q8VDF2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Uhrf1Q8VDF2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Uhrf1Q8VDF2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Uhrf1Q8VDF2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.81■□□□□ 0.12
Uhrf1Q8VDF2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Uhrf1Q8VDF2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Uhrf1Q8VDF2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Uhrf1Q8VDF2 Gm9824-201ENSMUST00000178707 561 ntBASIC15.81■□□□□ 0.12
Uhrf1Q8VDF2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Uhrf1Q8VDF2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Uhrf1Q8VDF2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Uhrf1Q8VDF2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.81■□□□□ 0.12
Uhrf1Q8VDF2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Uhrf1Q8VDF2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Uhrf1Q8VDF2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Uhrf1Q8VDF2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Uhrf1Q8VDF2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Uhrf1Q8VDF2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Uhrf1Q8VDF2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Uhrf1Q8VDF2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Gm5866-201ENSMUST00000177881 973 ntBASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uhrf1Q8VDF2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Uhrf1Q8VDF2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.79■□□□□ 0.12
Uhrf1Q8VDF2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Uhrf1Q8VDF2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Uhrf1Q8VDF2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Uhrf1Q8VDF2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
Uhrf1Q8VDF2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Uhrf1Q8VDF2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.79■□□□□ 0.12
Uhrf1Q8VDF2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Uhrf1Q8VDF2 Gm38294-201ENSMUST00000192831 381 ntBASIC15.79■□□□□ 0.12
Uhrf1Q8VDF2 Gm38225-201ENSMUST00000194001 393 ntBASIC15.79■□□□□ 0.12
Uhrf1Q8VDF2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.79■□□□□ 0.12
Uhrf1Q8VDF2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.79■□□□□ 0.12
Uhrf1Q8VDF2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Uhrf1Q8VDF2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Uhrf1Q8VDF2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Uhrf1Q8VDF2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Uhrf1Q8VDF2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Uhrf1Q8VDF2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms