Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Gm19164-201ENSMUST00000210667 640 ntBASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.52□□□□□ -0.08
Ndc1Q8VCB1 Prob1-201ENSMUST00000097619 3021 ntBASIC14.52□□□□□ -0.08
Ndc1Q8VCB1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ndc1Q8VCB1 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Ndc1Q8VCB1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.52□□□□□ -0.08
Ndc1Q8VCB1 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ndc1Q8VCB1 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ndc1Q8VCB1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ndc1Q8VCB1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ndc1Q8VCB1 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ndc1Q8VCB1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ndc1Q8VCB1 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Ndc1Q8VCB1 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Ndc1Q8VCB1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ndc1Q8VCB1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ndc1Q8VCB1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ndc1Q8VCB1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ndc1Q8VCB1 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.52□□□□□ -0.09
Ndc1Q8VCB1 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.52□□□□□ -0.09
Ndc1Q8VCB1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Ndc1Q8VCB1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ndc1Q8VCB1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ndc1Q8VCB1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.52□□□□□ -0.09
Ndc1Q8VCB1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ndc1Q8VCB1 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ndc1Q8VCB1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ndc1Q8VCB1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ndc1Q8VCB1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ndc1Q8VCB1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ndc1Q8VCB1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ndc1Q8VCB1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.52□□□□□ -0.09
Ndc1Q8VCB1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.52□□□□□ -0.09
Ndc1Q8VCB1 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ndc1Q8VCB1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.52□□□□□ -0.09
Ndc1Q8VCB1 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ndc1Q8VCB1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ndc1Q8VCB1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.5□□□□□ -0.09
Ndc1Q8VCB1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.5□□□□□ -0.09
Ndc1Q8VCB1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.5□□□□□ -0.09
Ndc1Q8VCB1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ndc1Q8VCB1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ndc1Q8VCB1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ndc1Q8VCB1 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Ndc1Q8VCB1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ndc1Q8VCB1 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.5□□□□□ -0.09
Ndc1Q8VCB1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms