Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Gm7222-201ENSMUST00000117512 906 ntBASIC14.23□□□□□ -0.13
Rfc3Q8R323 Gm13036-201ENSMUST00000117799 748 ntBASIC14.23□□□□□ -0.13
Rfc3Q8R323 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.23□□□□□ -0.13
Rfc3Q8R323 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc3Q8R323 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.23□□□□□ -0.13
Rfc3Q8R323 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc3Q8R323 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.23□□□□□ -0.13
Rfc3Q8R323 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rfc3Q8R323 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc3Q8R323 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc3Q8R323 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Psmb5-202ENSMUST00000227257 622 ntBASIC14.22□□□□□ -0.13
Rfc3Q8R323 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.22□□□□□ -0.13
Rfc3Q8R323 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.22□□□□□ -0.13
Rfc3Q8R323 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.22□□□□□ -0.13
Rfc3Q8R323 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc3Q8R323 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc3Q8R323 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc3Q8R323 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc3Q8R323 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc3Q8R323 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc3Q8R323 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc3Q8R323 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc3Q8R323 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc3Q8R323 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc3Q8R323 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc3Q8R323 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.21□□□□□ -0.13
Rfc3Q8R323 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc3Q8R323 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.21□□□□□ -0.13
Rfc3Q8R323 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rfc3Q8R323 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc3Q8R323 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc3Q8R323 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.21□□□□□ -0.13
Rfc3Q8R323 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rfc3Q8R323 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rfc3Q8R323 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rfc3Q8R323 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rfc3Q8R323 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rfc3Q8R323 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc3Q8R323 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Rfc3Q8R323 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc3Q8R323 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Rfc3Q8R323 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc3Q8R323 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc3Q8R323 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc3Q8R323 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc3Q8R323 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc3Q8R323 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Rfc3Q8R323 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms