Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Hmgcs1Q8JZK9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgcs1Q8JZK9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgcs1Q8JZK9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgcs1Q8JZK9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.71□□□□□ -0.05
Hmgcs1Q8JZK9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgcs1Q8JZK9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgcs1Q8JZK9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.71□□□□□ -0.05
Hmgcs1Q8JZK9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgcs1Q8JZK9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgcs1Q8JZK9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgcs1Q8JZK9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgcs1Q8JZK9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgcs1Q8JZK9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgcs1Q8JZK9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgcs1Q8JZK9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgcs1Q8JZK9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Hmgcs1Q8JZK9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hmgcs1Q8JZK9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Hmgcs1Q8JZK9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.71□□□□□ -0.06
Hmgcs1Q8JZK9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hmgcs1Q8JZK9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hmgcs1Q8JZK9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Gm14859-201ENSMUST00000117752 357 ntBASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Gm7506-201ENSMUST00000207758 815 ntBASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgcs1Q8JZK9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgcs1Q8JZK9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgcs1Q8JZK9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.68□□□□□ -0.06
Hmgcs1Q8JZK9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgcs1Q8JZK9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Hmgcs1Q8JZK9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgcs1Q8JZK9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Hmgcs1Q8JZK9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgcs1Q8JZK9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgcs1Q8JZK9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgcs1Q8JZK9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Hmgcs1Q8JZK9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgcs1Q8JZK9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgcs1Q8JZK9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Hmgcs1Q8JZK9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgcs1Q8JZK9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.68□□□□□ -0.06
Hmgcs1Q8JZK9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Hmgcs1Q8JZK9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgcs1Q8JZK9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms