Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfwd3Q8CIK8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.48□□□□□ -0.09
Rfwd3Q8CIK8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Gm6089-201ENSMUST00000197666 938 ntBASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfwd3Q8CIK8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rfwd3Q8CIK8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms