Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syne4Q8CII8 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.34■□□□□ 0.37
Syne4Q8CII8 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.34■□□□□ 0.37
Syne4Q8CII8 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syne4Q8CII8 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syne4Q8CII8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syne4Q8CII8 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syne4Q8CII8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syne4Q8CII8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syne4Q8CII8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syne4Q8CII8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syne4Q8CII8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Syne4Q8CII8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syne4Q8CII8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.34■□□□□ 0.37
Syne4Q8CII8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Syne4Q8CII8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Syne4Q8CII8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Syne4Q8CII8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Syne4Q8CII8 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.33■□□□□ 0.37
Syne4Q8CII8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Syne4Q8CII8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Syne4Q8CII8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Syne4Q8CII8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syne4Q8CII8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syne4Q8CII8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syne4Q8CII8 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Syne4Q8CII8 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Syne4Q8CII8 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Syne4Q8CII8 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC17.33■□□□□ 0.36
Syne4Q8CII8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syne4Q8CII8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syne4Q8CII8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.33■□□□□ 0.36
Syne4Q8CII8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syne4Q8CII8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
Syne4Q8CII8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Syne4Q8CII8 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syne4Q8CII8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Syne4Q8CII8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.32■□□□□ 0.36
Syne4Q8CII8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syne4Q8CII8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Syne4Q8CII8 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Syne4Q8CII8 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.32■□□□□ 0.36
Syne4Q8CII8 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syne4Q8CII8 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Syne4Q8CII8 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syne4Q8CII8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Syne4Q8CII8 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syne4Q8CII8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Syne4Q8CII8 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC17.32■□□□□ 0.36
Syne4Q8CII8 Gm18049-201ENSMUST00000208909 581 ntBASIC17.32■□□□□ 0.36
Syne4Q8CII8 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.32■□□□□ 0.36
Syne4Q8CII8 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.32■□□□□ 0.36
Syne4Q8CII8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syne4Q8CII8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Syne4Q8CII8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syne4Q8CII8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Syne4Q8CII8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Syne4Q8CII8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syne4Q8CII8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Syne4Q8CII8 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Gm29541-201ENSMUST00000191351 678 ntBASIC17.31■□□□□ 0.36
Syne4Q8CII8 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Gm43767-201ENSMUST00000198933 381 ntBASIC17.31■□□□□ 0.36
Syne4Q8CII8 Gm7730-201ENSMUST00000212486 454 ntBASIC17.31■□□□□ 0.36
Syne4Q8CII8 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.31■□□□□ 0.36
Syne4Q8CII8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Syne4Q8CII8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syne4Q8CII8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syne4Q8CII8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Syne4Q8CII8 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syne4Q8CII8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syne4Q8CII8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Syne4Q8CII8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Syne4Q8CII8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Syne4Q8CII8 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms