Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm12497-201ENSMUST00000138778 237 ntBASIC13.74□□□□□ -0.21
ShfQ8CG80 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.74□□□□□ -0.21
ShfQ8CG80 Gm27742-201ENSMUST00000184667 60 ntBASIC13.74□□□□□ -0.21
ShfQ8CG80 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.74□□□□□ -0.21
ShfQ8CG80 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShfQ8CG80 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.74□□□□□ -0.21
ShfQ8CG80 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShfQ8CG80 Gm18622-201ENSMUST00000219361 595 ntBASIC13.74□□□□□ -0.21
ShfQ8CG80 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShfQ8CG80 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShfQ8CG80 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShfQ8CG80 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShfQ8CG80 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShfQ8CG80 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShfQ8CG80 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShfQ8CG80 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ShfQ8CG80 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
ShfQ8CG80 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
ShfQ8CG80 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
ShfQ8CG80 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
ShfQ8CG80 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
ShfQ8CG80 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
ShfQ8CG80 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
ShfQ8CG80 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.73□□□□□ -0.21
ShfQ8CG80 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.73□□□□□ -0.21
ShfQ8CG80 Gm15165-201ENSMUST00000118140 502 ntBASIC13.73□□□□□ -0.21
ShfQ8CG80 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
ShfQ8CG80 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
ShfQ8CG80 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
ShfQ8CG80 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.73□□□□□ -0.21
ShfQ8CG80 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.73□□□□□ -0.21
ShfQ8CG80 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ShfQ8CG80 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ShfQ8CG80 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
ShfQ8CG80 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ShfQ8CG80 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ShfQ8CG80 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ShfQ8CG80 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.72□□□□□ -0.21
ShfQ8CG80 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ShfQ8CG80 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.72□□□□□ -0.21
ShfQ8CG80 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ShfQ8CG80 Gm6659-201ENSMUST00000174752 547 ntBASIC13.72□□□□□ -0.21
ShfQ8CG80 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.72□□□□□ -0.21
ShfQ8CG80 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.72□□□□□ -0.21
ShfQ8CG80 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ShfQ8CG80 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.72□□□□□ -0.21
ShfQ8CG80 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ShfQ8CG80 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ShfQ8CG80 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ShfQ8CG80 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ShfQ8CG80 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ShfQ8CG80 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ShfQ8CG80 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ShfQ8CG80 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.72□□□□□ -0.21
ShfQ8CG80 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ShfQ8CG80 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ShfQ8CG80 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ShfQ8CG80 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ShfQ8CG80 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ShfQ8CG80 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ShfQ8CG80 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.71□□□□□ -0.21
ShfQ8CG80 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ShfQ8CG80 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ShfQ8CG80 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.71□□□□□ -0.21
ShfQ8CG80 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ShfQ8CG80 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ShfQ8CG80 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ShfQ8CG80 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ShfQ8CG80 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ShfQ8CG80 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
ShfQ8CG80 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ShfQ8CG80 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
ShfQ8CG80 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
ShfQ8CG80 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ShfQ8CG80 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.71□□□□□ -0.21
ShfQ8CG80 Gm25745-201ENSMUST00000174945 133 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms