Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rab43Q8CG50 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Rab43Q8CG50 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rab43Q8CG50 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rab43Q8CG50 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rab43Q8CG50 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rab43Q8CG50 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.97□□□□□ -0.01
Rab43Q8CG50 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rab43Q8CG50 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rab43Q8CG50 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rab43Q8CG50 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rab43Q8CG50 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.97□□□□□ -0.01
Rab43Q8CG50 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.97□□□□□ -0.01
Rab43Q8CG50 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.97□□□□□ -0.01
Rab43Q8CG50 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rab43Q8CG50 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Rab43Q8CG50 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rab43Q8CG50 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rab43Q8CG50 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.97□□□□□ -0.01
Rab43Q8CG50 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rab43Q8CG50 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rab43Q8CG50 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.97□□□□□ -0.01
Rab43Q8CG50 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rab43Q8CG50 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rab43Q8CG50 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rab43Q8CG50 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Rab43Q8CG50 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rab43Q8CG50 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rab43Q8CG50 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rab43Q8CG50 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rab43Q8CG50 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rab43Q8CG50 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.96□□□□□ -0.01
Rab43Q8CG50 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Rab43Q8CG50 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rab43Q8CG50 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rab43Q8CG50 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rab43Q8CG50 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.96□□□□□ -0.01
Rab43Q8CG50 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rab43Q8CG50 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Rab43Q8CG50 Mir6990-201ENSMUST00000183724 91 ntBASIC14.96□□□□□ -0.01
Rab43Q8CG50 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rab43Q8CG50 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.96□□□□□ -0.01
Rab43Q8CG50 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.96□□□□□ -0.01
Rab43Q8CG50 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rab43Q8CG50 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rab43Q8CG50 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.96□□□□□ -0.01
Rab43Q8CG50 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rab43Q8CG50 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.96□□□□□ -0.01
Rab43Q8CG50 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Rab43Q8CG50 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.96□□□□□ -0.01
Rab43Q8CG50 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rab43Q8CG50 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rab43Q8CG50 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rab43Q8CG50 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Rab43Q8CG50 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rab43Q8CG50 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rab43Q8CG50 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rab43Q8CG50 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rab43Q8CG50 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rab43Q8CG50 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.95□□□□□ -0.02
Rab43Q8CG50 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rab43Q8CG50 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rab43Q8CG50 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rab43Q8CG50 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rab43Q8CG50 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rab43Q8CG50 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rab43Q8CG50 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Rab43Q8CG50 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rab43Q8CG50 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rab43Q8CG50 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rab43Q8CG50 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rab43Q8CG50 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rab43Q8CG50 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rab43Q8CG50 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.94□□□□□ -0.02
Rab43Q8CG50 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms